Comprehensive data ingestion solutions for uploading scanned slides and metadata

Streamline digital pathology workflows with automated data ingestion solutions

Free your laboratory personnel from manually managing image files and metadata spreadsheets

Pathcore’s suite of data ingestion solutions provide automation and free laboratory personnel from manual tasks such as uploading scanned slides and managing spreadsheets. With a range of options for importing study metadata and builtin integrations with laboratory information systems, pathologists and scientists can save time and benefit from a single pane of glass while reviewing digital pathology studies.

Connect a scanner

Automate upload of scanned slides in real time

Bulk import slides

Point and click to upload slides and folders

LIS integration

Import study metadata from a connected LIS

Metadata import

Easily import study metadata from a spreadsheet

Drag and drop

Upload images and files easily from any browser

File discovery

Automate discovery and ingestion of stored images

Dedicated upload tool

Upload images quickly, securely and reliably, in the background, while you do other things. Our hassle free Upload Client tool is designed for large and frequent image upload scenarios. It’s great for automating uploads of newly scanned slides from a connected scanner, and for adhoc upload of images received from CROs and collaborators.

Features
Handsfree, fast, reliable and secure uploads
Upload in the background 24 hours a day
Track and monitor upload progress

Upload from a browser

Drag and drop files from your computer onto your favorite browser. Browser uploads are quick and easy for internal users and collaborators. We’ve made this process easy and robust so that you may never need to look for more, even for complex and multi-file image formats.

Features
Drag and drop images from your computer
Monitor and prioritize the upload queue
Support for complex and multi-file images

PathcoreFlow is accessible through many web browsers and across devices

LIS integrations

Connect your laboratory information management system (LIMS) for efficient and bidirectional transfer of study and image metadata. Choose from a series of built-in integrations or quickly develop your own custom integration by leveraging our Data Connector framework.

Features
Automate exchange of metadata
Leverage existing integrations
Easily customizable for your site

Image ingestion service

Designed for large customers with self-managed deployments, our image ingestion service (IIS) can detect and virtually mirror the structure and content of networked storage systems. Without data duplication, IT departments can manage large image collections centrally and allow users to virtually organize and access the collection without exposing the underlying storage access.

Features
Mirror multiple network storage systems
Manage data centrally without duplication
Virtually organize and access data

Bulk metadata import

Avoid time consuming and manual data entry with bulk metadata imports. Our automated CSV parser will walk you through the steps of matching study data in a CSV file to specific images in the Repository. This intelligent and repeatable process can save hours and improve your laboratory workflow overnight.

Features
Bulk import metadata from CSV
Designed for adhoc import of metadata
File detection and field matching support

Custom developed solutions

Use our Restful APIs to build any custom integration for data ingestion and data export. Leverage our technical support for guidance, best practices and integration examples, or rely on our professional services team to build it for you and to your specific needs.

We've made it easier than ever to manage your virtual slide uploads and study metadata.

Save time with automatic uploads and easily handle complex image formats and multi-file image formats like OME-TIFF, VSI, NDPIS, AFI.

Comprehensive data ingestion solutions for uploading scanned slides and metadata

Free your laboratory personnel from manually managing image files and metadata spreadsheets

Connect a scanner

Bulk import slides

LIS integration

Metadata import

Drag and drop

File discovery

Dedicated upload tool

Features

Upload from a browser

Features

LIS integrations

Features

Image ingestion service

Features

Bulk metadata import

Features

Custom developed solutions

We've made it easier than ever to manage your virtual slide uploads and study metadata.

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